Package: covdata 1.01

covdata: COVID-19 Data

COVID-19 related data from the ECDC, the COVID-19 Tracking Project, the New York Times, the Human Mortality Database, and Apple. Packaged for R.

Authors:Kieran Healy [aut, cre]

covdata_1.01.tar.gz
covdata_1.01.zip(r-4.5)covdata_1.01.zip(r-4.4)covdata_1.01.zip(r-4.3)
covdata_1.01.tgz(r-4.4-any)covdata_1.01.tgz(r-4.3-any)
covdata_1.01.tar.gz(r-4.5-noble)covdata_1.01.tar.gz(r-4.4-noble)
covdata_1.01.tgz(r-4.4-emscripten)covdata_1.01.tgz(r-4.3-emscripten)
covdata.pdf |covdata.html
covdata/json (API)
NEWS

# Install 'covdata' in R:
install.packages('covdata', repos = c('https://kjhealy.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/kjhealy/covdata/issues

Datasets:
  • apple_mobility - Apple Mobility Data
  • cdc_catchments - CDC surveillance network and network catchment area
  • cdc_deaths_by_age - CDC Surveillance Network Death Counts by Age
  • cdc_deaths_by_sex - CDC provisional death counts by sex
  • cdc_deaths_by_state - CDC provisional death counts by state
  • cdc_deaths_by_week - CDC Provisional death counts by week
  • countries - Country Names and ISO codes
  • covnat_daily - Daily international COVID-19 cases and deaths for 2020
  • covnat_weekly - Weekly International COVID-19 cases and deaths, current as of Sunday, January 22, 2023
  • covus - COVID-19 data for the USA, current as of Sunday, January 22, 2023
  • covus_ethnicity - COVID-19 case and death counts for the USA by Hispanic/Non-Hispanic ethnicity and state current as of Sunday, January 22, 2023
  • covus_race - COVID-19 case and death counts for the USA by race and state current as of Sunday, January 22, 2023
  • nchs_sas - Provisional COVID-19 Death Counts by Sex, Age, and State
  • nchs_wdc - Weekly Counts of Deaths by State and Select Causes 2014-2021
  • nchs_wss - Provisional Death Counts for Coronavirus Disease (COVID-19): Weekly State-Specific Data Updates
  • nssp_covid_er_nat - NSSP National COVID-related ER Visits
  • nssp_covid_er_reg - NSSP Regional COVID ER Visits
  • nytcovcounty - NYT COVID-19 data for US counties, current as of Sunday, January 22, 2023
  • nytcovstate - NYT COVID-19 data for the US states, current as of Sunday, January 22, 2023
  • nytcovus - NYT COVID-19 data for the US, current as of Sunday, January 22, 2023
  • nytexcess - NYT Excess Mortality Estimates, current as of Sunday, January 22, 2023
  • stmf - Short Term Mortality Fluctuations (STMF) data series
  • uspop - State population estimates for US States

On CRAN:

4.73 score 84 stars 127 scripts 3 exports 21 dependencies

Last updated 2 years agofrom:0626c6522c. Checks:ERROR: 1 WARNING: 6. Indexed: yes.

TargetResultDate
Doc / VignettesFAILOct 23 2024
R-4.5-winWARNINGOct 23 2024
R-4.5-linuxWARNINGOct 23 2024
R-4.4-winWARNINGOct 23 2024
R-4.4-macWARNINGOct 23 2024
R-4.3-winWARNINGOct 23 2024
R-4.3-macWARNINGOct 23 2024

Exports:%>%%nin%mmwr_week_to_date

Dependencies:clicpp11dplyrfansigenericsgluelifecyclemagrittrpillarpkgconfigpurrrR6rlangstringistringrtibbletidyrtidyselectutf8vctrswithr

Readme and manuals

Help Manual

Help pageTopics
%nin%%nin%
Apple Mobility Dataapple_mobility
CDC surveillance network and network catchment areacdc_catchments
CDC Surveillance Network Death Counts by Agecdc_deaths_by_age
CDC provisional death counts by sexcdc_deaths_by_sex
CDC provisional death counts by statecdc_deaths_by_state
CDC Provisional death counts by weekcdc_deaths_by_week
Country Names and ISO codescountries
Daily international COVID-19 cases and deaths for 2020covnat_daily
Weekly International COVID-19 cases and deaths, current as of Sunday, January 22, 2023covnat_weekly
COVID-19 data for the USA, current as of Sunday, January 22, 2023covus
COVID-19 case and death counts for the USA by Hispanic/Non-Hispanic ethnicity and state current as of Sunday, January 22, 2023covus_ethnicity
COVID-19 case and death counts for the USA by race and state current as of Sunday, January 22, 2023covus_race
fmt_ncfmt_nc
fmt_nrfmt_nr
FUNCTION_TITLEmmwr_week_to_date
FUNCTION_TITLEMMWRweek2Date
FUNCTION_TITLEMMWRweekday
Provisional COVID-19 Death Counts by Sex, Age, and Statenchs_sas
Weekly Counts of Deaths by State and Select Causes 2014-2021nchs_wdc
Provisional Death Counts for Coronavirus Disease (COVID-19): Weekly State-Specific Data Updatesnchs_wss
NSSP National COVID-related ER Visitsnssp_covid_er_nat
NSSP Regional COVID ER Visitsnssp_covid_er_reg
NYT COVID-19 data for US counties, current as of Sunday, January 22, 2023nytcovcounty
NYT COVID-19 data for the US states, current as of Sunday, January 22, 2023nytcovstate
NYT COVID-19 data for the US, current as of Sunday, January 22, 2023nytcovus
NYT Excess Mortality Estimates, current as of Sunday, January 22, 2023nytexcess
FUNCTION_TITLEstart_date
Short Term Mortality Fluctuations (STMF) data seriesstmf
Make a table of stmf country yearsstmf_country_years
tabulartabular
State population estimates for US Statesuspop